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Category: List of Bases 2011 2011 ICTP Activities in Trieste ICTP Activities in Trieste
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lecture

Start Time:

31 October 2011 at 08:30

Ends On:

4 November 2011

Location:

Trieste - Italy

Venue:

AGH (Kastler Lecture Hall)

Organizer(s):

Organizing Committee: P. Kahlem [EBI - Cambridge], B. Mishra [NYU/Courant Institute] R. Rabadan [Columbia University], G. Stolovitzky [IBM Research, USA]; Local Organizer: M. Marsili [ICTP].

Description:


Material:

09:30
11:00
For administrative formalities
01h30'
11:00
11:30
Opening
30'
11:30
13:00
Introduction to Virus Evolution and Cancer Genomics
01h30'
R. Rabadan
Columbia University - NY, United States of America
13:00
14:30
LUNCH BREAK
01h30'
14:30
16:00
From DNA Sequencing to Genomes: the Assembly Challenge
01h30'
G. Narzisi
Cold Spring Harbor Laboratory (CSHL), United States of America
16:30
18:00
Laboratory Tutorials
01h30'
Hossein KHIABANIAN & Rachel MELAMED
Columbia University, NY - United States of America
18:30
18:30
WELCOME PARTY
09:30
11:00
DNA Sequencing Technologies: Past, Present, and Future
01h30'
A. Hassibi
University of Texas at Austin, United States of America
11:00
11:30
Coffee Break
30'
11:30
13:00
Introduction to Systems Biology - Examples from the ENFIN Consortium
01h30'
P. Kahlem
European Bioinformatics Institute - Cambridge, United Kingdom
13:00
14:30
LUNCH BREAK
01h30'
14:30
16:00
Laboratory Tutorials
01h30'
Hossein KHIABANIAN & Rachel MELAMED
Columbia University - NY, United States of America
10:00
10:15
Conference Opening
15'
10:15
11:00
Using Systems Biology to unravel Host-pathogen Interactions
45'
S. Shapira
Columbia University, New York - USA
11:00
11:30
Coffee Break
30'
11:30
12:15
Statistical physics approach to the prediction of native contacts in proteins from sequence variability
45'
R. Zecchina
Politecnico di Torino, Italy
12:15
13:00
(How) can New Sequencing Technologies help Algorithmic/Executable Systems Biology?
45'
E. R. Mendoza
Univ. of the Philippines Diliman; and Univ. Ludwig Maximilians, Munich
13:00
14:30
LUNCH BREAK
01h30'
14:30
15:15
Sequencing, Sequencing, and Sequencing
45'
Ning Li
BGI, Denmark
15:15
16:00
Life on the edge: Proteins are close to their solubility limits
45'
M. Vendruscolo
University of Cambridge, United Kingdom
18:30
18:30
RECEPTION
09:30
10:15
Reverse engineering whole-genome networks using high performance parallel computers
45'
S. Aluru
S. Aluru, Iowa State University, USA; and Indian Institute of Technology Bombay, India
10:15
11:00
Tracking the Evolution of Influenza Viruses
45'
H. Khiabanian
Columbia University, NY - United States of America
11:00
11:30
Coffee Break
30'
11:30
12:15
Cancer Genome Analysis Pipeline
45'
M. Vazquez
CNIO, Madrid
12:15
13:00
The Master Regulators of Stem Cells and Cancer in the Brain
45'
A. Iavarone
Columbia University - NY, United States of America
13:00
14:30
LUNCH BREAK
01h30'
14:30
15:15
Genome-based drug re-purposing: a new golden age for DNA Microarrays?
45'
F. Iorio
EMBL-EBI Cambridge, United Kingdom
15:15
16:00
Nonlinear Representation of the Genome: Elastic Genome Browsers
45'
V. Chandru
Strand Life Sciences Private Limited - Bangalore, India
09:30
10:15
Refining simple fundamental ideas to produce medically useful techniques
45'
C. R. Cantor
SEQUENOM - CA, United States of America
10:15
11:00
Using next generation sequencing to unravel the forces shaping the genetic landscape in populations of S. cerevosoae
45'
D. Cavalieri
University of Florence, Italy
11:00
11:30
Coffee Break
30'
11:30
12:15
Advanced Nucleic Acid Sequence Analysis Methods
45'
I. Gut
Centre Nacional d'Analisis Genomica - CNAG, Barcelona; Spain
12:15
13:00
Cis-regulatory Architecture of the Human Genome
45'
John A. Stamatoyannopoulos
University of Washington, Seattle - United States of America
13:00
14:30
LUNCH BREAK
01h30'
If you want to make a direct link from your Web page to this agenda, please use this URL:
http://cdsagenda5.ictp.trieste.it/full_display.php?ida=a10159

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