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Category: List of Bases 2009 2009 ICTP activities in Trieste ICTP activities in Trieste
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lecture

Cosponsor(s):

GENNETEC - Genetic Networks: Emergence and Complexity

Start Time:

8 June 2009 at 09:00

Ends On:

12 June 2009

Location:

Trieste - Italy

Venue:

LB (Main Lecture Hall)

Organizer(s):

M. Aguier, W. Banzhaf, G. Bianconi, R. Dilao, S. Franz, F. Képès, M. Lässig, O. Martin, D. Segré, M. Weigt. Local Organizer: M. Marsili

Material:

no notes available

Monday, 8 June 2009

Description: SCHOOL - DAY 1

Room: Leonardo da Vinci Building Main Lecture Hall

09:00
10:00
REGISTRATION
01h00'
Room: Leonardo da Vinci Building, Lobby
10:00
11:00
Complex networks of biomolecular interactions and chromosome architecture
01h00'
F. KEPES
11:00
11:30
Coffee break
30'
11:30
12:30
Complex networks of biomolecular interactions and chromosome architecture
01h00'
F. KEPES
12:30
14:00
Lunch
01h30'
14:00
15:00
Complex networks of biomolecular interactions and chromosome architecture
01h00'
F. KEPES
15:00
16:00
Introduction to the dynamics and evolution of metabolic networks
01h00'
D. SEGRE
16:00
16:30
Coffee break
30'
16:30
17:30
Introduction to the dynamics and evolution of metabolic networks
01h00'
D. SEGRE
Tuesday, 9 June 2009

Description: SCHOOL - DAY 2

Room: Leonardo da Vinci Building Main Lecture Hall

09:00
10:00
Introduction to the dynamics and evolution of metabolic networks
01h00'
D. SEGRE
10:00
11:00
Introduction to biological evolution
01h00'
M. LAESSIG
11:00
11:30
Coffee break
30'
11:30
12:30
Introduction to biological evolution
01h00'
M. LAESSIG
12:30
14:00
Lunch
01h30'
14:00
15:00
Some principles of molecular evolution
01h00'
A. WAGNER
15:00
16:00
Some principles of molecular evolution
01h00'
A. WAGNER
16:00
16:30
Coffee break
30'
16:30
17:30
Complex networks of biomolecular interactions and chromosome architecture
01h00'
F. KEPES
19:30
21:30
RECEPTION
02h00'
Wednesday, 10 June 2009

Description: CONFERENCE - DAY 1

Room: Leonardo da Vinci Building Main Lecture Hall

08:30
09:00
REGISTRATION
30'
Room: Leonardo da Vinci Building, Lobby
09:00
09:40
Artificial Regulatory Networks
40'
W. BANZHAF
09:40
10:20
Integration of Experiments and Metabolic Modeling Facilitate Network Design & Biological Discovery
40'
J. REED
10:20
11:00
On the relationship between robustness and evolutionary innovation
40'
A. WAGNER
11:00
11:30
Coffee break
30'
11:30
12:10
Individual histories and selection in population dynamics
40'
E. KUSELL
12:10
12:50
The impact of alterations in genomic neighbourhood on human evolution
40'
M. BABU
12:50
14:20
Lunch
01h30'
14:20
15:00
TBA
40'
R. ZECCHINA
15:00
15:40
Biological strategies of motility
40'
M. VERGASSOLA
15:40
16:20
About preservation of properties along embedding of biological regulatory networks
40'
M. MABROUKI
16:20
16:40
Coffee break
20'
16:40
17:20
Neutral networks and evolutionary dynamics
40'
O. MARTIN
17:20
18:00
The specificity of bacterial protein-protein interactions & the inverse Potts problem
40'
A. PROCACCINI
Thursday, 11 June 2009

Description: CONFERENCE - DAY 2

Room: Leonardo da Vinci Building Main Lecture Hall

09:00
09:40
Modeling nucleosome mediated epigenetics and gene regulation
40'
K. SNEPPEN
09:40
10:20
Modeling the circadian clock: From molecular mechanism to physiological disorders
40'
J.-C. LELOUP
10:20
11:00
Laws of prokaryotic genome evolution
40'
E. VAN NIMWEGEN
11:00
11:30
Coffee break
30'
11:30
12:10
"Home depot" model of evolution of prokaryotic metabolic networks and their regulation
40'
S. MASLOV
12:10
12:50
Modeling large-scale metabolic networks: Structure, Function and Evolution
40'
O. EBENHOEH
12:50
14:20
Lunch
01h30'
14:20
15:00
Structure and Boolean dynamics of E. coli's genetic regulatory network: Origin of homeostasis and flexibility of response
40'
S. JAIN
15:00
15:40
Adaptive Environmental Conditioning: Prediction of Environmental Changes by Micro-Organisms
40'
A. MITCHELL
15:40
16:20
Network ensembles and the definition of priors in genetic network inference problems
40'
G. BIANCONI
16:20
16:40
Coffee break
20'
16:40
17:20
Calibration of a genetic network model for maternal and gap genes in Drosophila
40'
D. MURARO
17:20
18:00
Transcriptional regulation: consequences on chromosome structuring and genome organization
40'
I. JUNIER
Friday, 12 June 2009

Description: CONFERENCE - DAY 3

Room: Leonardo da Vinci Building Main Lecture Hall

09:00
09:40
Analysis of the spatial organization of the bacterial chromosome
40'
O. ESPELI
09:40
10:20
Spectrally Assigned Localization Microscopy: A new lightoptical approach to study chromosome geometry on the nanoscale
40'
C. CREMER
10:20
11:00
Coarse-grained Simulations of DNA knotting in conned geometries
40'
C. MICHELETTI
11:00
11:30
Coffee break
30'
11:30
12:10
Viable flux states in metabolic networks: a statistical physics perspective
40'
A. DE MARTINO
12:10
12:50
Modeling nucleosome mediated epigenetics and gene regulation
40'
D. FERNANDEZ
12:50
14:20
Lunch
01h30'
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